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kaleidocell 0.1.0 documentation

  • Installation
  • Output files
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  • API Reference
  • Installation
  • Output files
  • Tutorials
  • API Reference

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  • kaleidocell.multi_sample_nmf
  • kaleidocell.derive_nmf_metaprograms
  • kaleidocell.get_metaprogram_metrics
  • kaleidocell.compute_mp_scores
  • kaleidocell.find_optimal_n_mp
  • kaleidocell.filter_by_scores
  • kaleidocell.filter_for_significant_obs
  • kaleidocell.drop_meta_programs
  • kaleidocell.merge_meta_programs
  • kaleidocell.propose_mp_actions
  • kaleidocell.apply_mp_actions
  • kaleidocell.run_gsea_pipeline
  • kaleidocell.plot_gsea_results
  • kaleidocell.plot_heatmap
  • kaleidocell.plot_convergence_plots
  • kaleidocell.plot_mp_scores_on_umap
  • kaleidocell.show_distribution_over_obs
  • kaleidocell.recompute_pca_umap
  • kaleidocell.get_html
  • kaleidocell.files
  • API Reference
  • kaleidocell.apply_mp_actions

kaleidocell.apply_mp_actions#

kaleidocell.apply_mp_actions(result_dict, actions_df)[source]#

Apply DROP and MERGE actions proposed by propose_mp_actions().

Parameters:
  • result_dict (dict) – Output of derive_nmf_metaprograms().

  • actions_df (pd.DataFrame) – Output of propose_mp_actions().

Returns:

Modified result_dict.

Return type:

dict

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