kaleidocell.compute_mp_scores

kaleidocell.compute_mp_scores(results_mp, adata)

Compute module scores for each meta-program.

Uses scanpy.tl.score_genes on a temporary copy of adata so the original object is never modified.

Parameters:

• results_mp (dict) – Output of derive_nmf_metaprograms().

• adata (AnnData) – Input dataset.

Returns:

Shape (n_cells × n_MPs) with per-cell module scores.

Return type:

pd.DataFrame